The present publication contains the µCT dataset and the 3D models analyzed in the following publication: Mautner, A.-K., A. E. Latimer, U. Fritz, and T. M. Scheyer. An updated description of the osteology of the pancake tortoise Malacochersus tornieri (Testudines: Testudinidae) with special focus on intraspecific variation. Journal of Morphology. https://doi.org/10.1002/jmor.20640 

Malacochersus tornieri ZM 100.102 View specimen

	M3#129 Virtual brain and inner ear endocast of Malacochersus tornieri (ZM 100.102; Zoological Museum of The University of Zurich). This virtual model is accompanied by the 3D dataset. Blue, endocranium; red, blood vessels; purple, semicircular canals; yellow, cranial nerves. Type: "3D_surfaces" doi: 10.18563/m3.sf.129   state:published	Download 3D surface file
	M3#130 3D dataset of skull of Malacochersus tornieri (ZM 100.102) Type: "3D_CT" doi: 10.18563/m3.sf.130   state:published	Download CT data

This contribution contains the 3D model of the holotype of Simplomys hugi, the new dormouse species from the locality of Glovelier described and figured in the following publication: New data on the Miocene dormouse Simplomys García-Paredes, 2009 from the peri-alpin basins of Switzerland and Germany: palaeodiversity of a rare genus in Central Europe. https://doi.org/10.1007/s12549-018-0339-y 

Simplomys hugi MJSN-GLM017-0001 View specimen

M3#385 the left maxilla with four teeth ( DP4, P4, M1 and M2) Type: "3D_surfaces" doi: 10.18563/m3.sf.385   state:published

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The present 3D Dataset contains the 3D models analyzed in the article entitled "One skull to rule them all? Descriptive and comparative anatomy of the masticatory apparatus in five mice species based on traditional and digital dissections" (Ginot et al. 2018, Journal of Morphology, https://doi.org/10.1002/jmor.20845). 

Mus cervicolor R7314 View specimen

M3#343 .ply surfaces of the skull and masticatory muscles of Mus cervicolor. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.343   state:published

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Mus caroli R7264 View specimen

M3#344 .ply surfaces of the skull and masticatory muscles of Mus caroli. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.344   state:published

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Mus fragilicauda R7260 View specimen

M3#345 .ply surfaces of the skull and masticatory muscles of Mus fragilicauda. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.345   state:published

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Mus pahari R7226 View specimen

M3#346 .ply surfaces of the skull and masticatory muscles of Mus pahari. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.346   state:published

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Mus minutoides minutoides-1 View specimen

M3#347 .ply surfaces of the skull and masticatory muscles of Mus minutoides. Created with MorphoDig, .pos and .ntw files also included. Scans were obtained thanks to the Institut des Sciences de l'Evolution de Montpellier MRI platform. Type: "3D_surfaces" doi: 10.18563/m3.sf.347   state:published

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The present 3D Dataset contains the 3D models analyzed in Benites-Palomino A., Velez-Juarbe J., Altamirano-Sierra A., Collareta A., Carrillo-Briceño J., and Urbina M. 2022. Sperm whales (Physeteroidea) from the Pisco Formation, Peru, and their Trophic role as fat-sources for Late Miocene sharks.
  

Scaphokogia cochlearis MUSM 978 View specimen

M3#977 juvenile Scaphokogia cochlearis Type: "3D_surfaces" doi: 10.18563/m3.sf.977   state:published

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This contribution contains the 3D model described and figured in the following publication: Ramdarshan A., Orliac M.J., 2015. Endocranial morphology of Microchoerus erinaceus (Euprimates, Tarsiiformes) and early evolution of the Euprimates brain. American Journal of Physical Anthropology. doi: 10.1002/ajpa.22868

  

Microchoerus erinaceus UM-PRR1771 View specimen

	M3#15 Labelled 3D model of the endocranial cast and sinuse of Microchoerus erinaceus. Type: "3D_surfaces" doi: 10.18563/m3.sf15   state:published	Download 3D surface file
	M3#1303 50µm voxel size µCT scan of the cranium of UM PRR1771 Type: "3D_CT" doi: 10.18563/m3.sf.1303   state:published	Download CT data

This contribution contains the 3D models described and figured in the following publication:Skull and Inner Ear Morphometrics in Sheep and Goats: Species and Breed Differentiation with Bioarchaeological Applications (Hemelsdael et al. submitted). The models include the external surface of a complete skull and inner ear of both a sheep (Ovis aries) and a goat (Capra hircus), generated from micro-CT scans. In the associated paper, we used 3D geometric morphometric data to assess inter and intra (i.e. between breeds) discrimination based on complete skulls, skull fragments and the semi-circular canals of the inner ear. 

Capra hircus Amp_1 View specimen

	M3#1806 Skull of the goat Amp_1 Type: "3D_surfaces" doi: 10.18563/m3.sf.1806   state:published	Download 3D surface file
	M3#1807 Inner ear of the goat Amp_1 Type: "3D_surfaces" doi: 10.18563/m3.sf.1807   state:published	Download 3D surface file

Ovis aries UM_RR_2331 View specimen

	M3#1808 Skull of the sheep UM_RR_2331 Type: "3D_surfaces" doi: 10.18563/m3.sf.1808   state:published	Download 3D surface file
	M3#1809 Inner ear of the sheep UM_RR_2331 Type: "3D_surfaces" doi: 10.18563/m3.sf.1809   state:published	Download 3D surface file

The present contribution contains the 3D model and dataset analyzed in the following publication: Scheyer, T. M., J. M. Neenan, T. Bodogan, H. Furrer, C. Obrist, and M. Plamondon. 2017. A new, exceptionally preserved juvenile specimen of Eusaurosphargis dalsassoi (Diapsida) and implications for Mesozoic marine diapsid phylogeny. Scientific Reports, https://doi.org/10.1038/s41598-017-04514-x . 

Eusaurosphargis dalsassoi PIMUZ A/III 4380 View specimen

	M3#179 94 extracted surfaces of skeletal elements of PIMUZ A/III 4380 Type: "3D_surfaces" doi: 10.18563/m3.sf.179   state:published	Download 3D surface file
	M3#180 Accompanying CT scan dataset Type: "3D_CT" doi: 10.18563/m3.sf.180   state:published	Download CT data

The present 3D Dataset contains the 3D models analyzed in: Amson et al., Under review. Evolutionary Adaptation to Aquatic Lifestyle in Extinct Sloths Can Lead to Systemic Alteration of Bone Structure doi:10.1098/rspb.2018.0270. 

Bradypus tridactylus MNHN ZM-MO-1999-1065 View specimen

M3#337 Brain endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.337   state:published

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Choloepus didactylus MNHN-ZM-MO-1996-594 View specimen

M3#338 Brain endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.338   state:published

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Thalassocnus natans MNHN-F-SAS-734 View specimen

M3#339 Brain endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.339   state:published

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Thalassocnus littoralis MNHN-F-SAS-1610 View specimen

M3#340 Brain endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.340   state:published

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Thalassocnus littoralis MNHN-F-SAS-1615 View specimen

M3#341 Brain endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.341   state:published

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Thalassocnus carolomartini SMNK-3814 View specimen

M3#342 Brain endocast lacking right olfactory bulb Type: "3D_surfaces" doi: 10.18563/m3.sf.342   state:published

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This contribution contains the 3D models described and figured in the following publication: Mennecart B., de Perthuis Ad., Rössner G.E., Guzmán J.A., de Perthuis Au., Costeur L. The first French tragulid skull (Mammalia, Ruminantia, Tragulidae) and associated tragulid remains from the Middle Miocene of Contres (Loir-et-Cher, France). Comptes Rendus Palévol. https://doi.org/10.1016/j.crpv.2017.08.004 

Dorcatherium crassum NMB Fa.213.abg View specimen

M3#181 The 3D surface files of the specimen NMB Fa.213 are the reconstructions of the main skull fragments, the right petrosal bone, and the left bony labyrinth. Type: "3D_surfaces" doi: 10.18563/m3.sf.181   state:published

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The present 3D Dataset contains the 3D model of a left dentary with m1-m3 analyzed in “A new fossil of Tayassuidae (Mammalia: Certartiodactyla) from the Pleistocene of northern Brazil”. The 3D model was generated using a laser scanning. 

cf. Pecari tajacu UFSM 11606 View specimen

M3#498 Left dentary with m1-m3 Type: "3D_surfaces" doi: 10.18563/m3.sf.498   state:published

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This contribution contains the 3D models described and figured in the following publication: Paulina-Carabajal A and Calvo JO 2021. Re-description of the braincase of the rebbachisaurid sauropod Limaysaurus tessonei and novel endocranial information based on CT scans. Anais da Academia Brasileira de Ciências 93(Suppl. 2): e20200762 https://doi.org/10.1590/0001-3765202120200762 

Limaysaurus tessonei MUCPv-205 View specimen

M3#700 Renderings of the virtually isolate braincase, brain, and right inner ear. Type: "3D_surfaces" doi: 10.18563/m3.sf.700   state:published

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This contribution contains 3D models of the cranial skeleton and muscles in an elephantfish (Callorhinchus milii) and a catshark (Scyliorhinus canicula), based on synchrotron tomographic scans. These datasets were analyzed and described in Dearden et al. (2021) “The morphology and evolution of chondrichthyan cranial muscles: a digital dissection of the elephantfish Callorhinchus milii and the catshark Scyliorhinus canicula.” Journal of Anatomy. 

Callorhinchus milii 001 View specimen

M3#708 3D models of the cranial skeleton and muscles of Callorhinchus milii, created using Mimics. Type: "3D_surfaces" doi: 10.18563/m3.sf.708   state:published

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Scyliorhinus canicula 002 View specimen

M3#709 3D models of the cranial skeleton and muscles of Scyliorhinus canicula, created using Mimics. Type: "3D_surfaces" doi: 10.18563/m3.sf.709   state:published

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The present 3D Dataset contains the 3D model analyzed in the following publication: Solé et al. (2018), Niche partitioning of the European carnivorous mammals during the paleogene. Palaios. https://doi.org/10.2110/palo.2018.022 

Hyaenodon leptorhynchus FSL848325 View specimen

M3#336 The specimen FSL848325 is separated in two fragments: the anterior part bears the incisors, the deciduous and permanent canines, while the posterior part bears the right P3, P4, M1 and M2. The P2 is isolated. When combined, the cranium length is approximatively 10.5 cm long. The anterior part is 6.9 cm long and 2.15 cm wide (taken at the level of the P1). The posterior part is 4.8 cm long. The anterior part of the cranium is very narrow. Type: "3D_surfaces" doi: 10.18563/m3.sf.336   state:published

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This contribution contains the 3D model described and figured in the following publication: Dubied, M., Mennecart, B. and Solé, F. 2019. The cranium of Proviverra typica (Mammalia, Hyaenodonta) and its impact on hyaenodont phylogeny and endocranial evolution. Palaeontology. https://doi.org/10.1111/pala.12437 

Proviverra typica NMB Em18 View specimen

M3#355 The file contain the cranium (yellow) and the endocast (blue) of the facial part and the brain case part of the type specimen of Proviverra typica (NMB Em18). Type: "3D_surfaces" doi: 10.18563/m3.sf.355   state:published

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The present 3D Dataset contains the 3D models analyzed in the following publication: Paulina-Carabajal, A., Ezcurra, M., Novas, F., 2019. New information on the braincase and endocranial morphology of the Late Triassic neotheropod Zupaysaurus rougieri using Computed Tomography data. Journal of Vertebrate Paleontology. https://doi.org/10.1080/02724634.2019.1630421
  

Zupaysaurus rougieri PULR 076 View specimen

M3#424 The Zip contains 3 files, which correspond to: PULR_076-M1: Zupaysaurus rougieri skull, braincase and cranial endocast PULR_076-M2: Zupaysaurus rougieri braincase PULR_076-M1: Zupaysaurus rougieri brain and inner ear Type: "3D_surfaces" doi: 10.18563/m3.sf.424   state:published

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The present Dataset contains the 3D model of the male genital organs of greater horseshoe bat, Rhinolophus ferrumequinum. This is the first detailed 3D structure of the soft-tissue genital organs of bats. The 3D model was generated using microCT and techniques of virtual reconstruction. 

Rhinolophus ferrumequinum JP18-006 View specimen

M3#521 The genital organs of male greater horseshoe bat. Type: "3D_surfaces" doi: 10.18563/m3.sf.521   state:published

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This contribution contains the 3D model(s) described and figured in the following publication: Carolina A. Hoffmann, P. G. Rodrigues, M. B. Soares & M. B. Andrade. 2021. Brain endocast of two non-mammaliaform cynodonts from southern Brazil: an ontogenetic and evolutionary approach, Historical Biology, 33:8, 1196-1207, https://doi.org/10.1080/08912963.2019.1685512 

Probelesodon kitchingi MCP 1600 PV View specimen

M3#978 3D model of the brain endocast of Probelesodon kitchingi. Type: "3D_surfaces" doi: 10.18563/m3.sf.978   state:published

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Massetognathus ochagaviae MCP 3871 PV View specimen

M3#979 3D model of the brain endocast of Massetognathus ochagaviae. Type: "3D_surfaces" doi: 10.18563/m3.sf.979   state:published

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In this contribution a third new species of the rare genus Burmesescorpiops Lourenço, 2016 is described. The discovery of this new element belonging to the family Palaeoeuscorpiidae Lourenço, 2003 and to the subfamily Archaeoscorpiopinae Lourenço, 2015 brings further elements to support the validity of the genus Burmesescorpiops. This generic group remains however, poorly speciose. This is the latest discovery of Burmesescorpiops wunpawng, the name is derived from the Kachin Hilltribe peoples who are indigenous to the area. The data provided here is a 3D surface. 

Burmesescorpiops wunpawng ps-gyi-01-25 View specimen

M3#1846 3d Surface Volume Type: "3D_surfaces" doi: 10.18563/m3.sf.1846   state:published

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This contribution contains the 3D models described and figured in the following publication: Molnar, JL, Pierce, SE, Bhullar, B-A, Turner, AH, Hutchinson, JR (accepted). Morphological and functional changes in the crocodylomorph vertebral column with increasing aquatic adaptation. Royal Society Open Science. 

Protosuchus richardsoni AMNH-VP 3024 View specimen

M3#44 8th and 9th dorsal vertebrae, 1st and 2nd lumbar vertebrae, and 5th lumbar and sacral vertebrae. Type: "3D_surfaces" doi: 10.18563/m3.sf44   state:published

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Terrestrisuchus gracilis NHM-PV R 7562 View specimen

M3#45 1st and 2nd lumbar vertebrae, and 5th lumbar and sacral vertebrae Type: "3D_surfaces" doi: 10.18563/m3.sf45   state:published

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Pelagosaurus typus NHM-PV OR 32598 View specimen

M3#46 7th and 8th dorsal vertebrae, 11th and 12th dorsal vertebrae, 15th dorsal vertebra and sacral vertebra. Type: "3D_surfaces" doi: 10.18563/m3.sf46   state:published

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Metriorhynchus superciliosus NHM-PV R 2054 View specimen

M3#47 6th and 7th dorsal vertebrae, 10th and 11th dorsal vertebrae, 17th dorsal vertebra and sacral vertebra Type: "3D_surfaces" doi: 10.18563/m3.sf47   state:published

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Crocodylus niloticus FNC0 View specimen

M3#48 7th and 8th dorsal vertebrae, 1st and 2nd lumbar vertebrae, 5th lumbar vertebra and sacral vertebra. Type: "3D_surfaces" doi: 10.18563/m3.sf48   state:published

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The present 3D Dataset contains the 3D model of the brain endocast of Neoepiblema acreensis analyzed in “Small within the largest: Brain size and anatomy of the extinct Neoepiblema acreensis, a giant rodent from the Neotropics”. The 3D model was generated using CT-Scanning and techniques of virtual reconstruction.
  

Neoepiblema acreensis UFAC 4515 View specimen

M3#502 Brain endocast of Neoepiblema acreensis Type: "3D_surfaces" doi: 10.18563/m3.sf.502   state:published

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