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2025-12
Volume 11, issue 04
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ISSN: 2274-0422

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Page 4 of 10, showing 20 record(s) out of 199 total

A 3D geometric morphometric dataset quantifying skeletal variation in birds
Alexander Bjarnason Logo and Roger Benson Logo
Published online: 09/02/2021

Keywords: birds; geometric morphometrics; macroevolution; Morphology; skeleton

https://doi.org/10.18563/journal.m3.125

  Abstract

    Macroevolution is integral to understanding the patterns of the diversification of life. As the life sciences increasingly use big data approaches, large multivariate datasets are required to test fundamental macroevolutionary hypotheses. In vertebrate evolution, large datasets have been created to quantify morphological variation, largely focusing on particular areas of the skeleton. We provide a landmarking protocol to quantify morphological variation in skeletal elements across the head, trunk, hindlimb and forelimb using 3-dimensional landmarks and semilandmarks, and present a large pan-skeletal database of bird morphology for 149 taxa across avian phylogeny using CT scan data. This large collection of 3D models and geometric morphometric data is open access and can be used in the future for new research, teaching and outreach. The 3D models and CT scans of the 149 specimens related to this project can be downloaded at MorphoSource (https://www.morphosource.org/projects/00000C420

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Published in Volume 07, issue 01 (2021)

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S.I. Data
3D atlas and comparative osteology of the middle ear ossicles among Eulipotyphla (Mammalia, Placentalia).
Daisuke Koyabu Logo
Published online: 03/05/2017

Keywords: aquatic adaptation; convergence; Eulipotyphla; fossorial adaptation; hearing

https://doi.org/10.18563/m3.3.2.e3

  Abstract

    Considerable morphological variations are found in the middle ear among mammals. Here I present a three-dimensional atlas of the middle ear ossicles of eulipotyphlan mammals. This group has radiated into various environments as terrestrial, aquatic, and subterranean habitats independently in multiple lineages. Therefore, eulipotyphlans are an ideal group to explore the form-function relationship of the middle ear ossicles. This comparative atlas of hedgehogs, true shrews, water shrews, mole shrews, true moles, and shrew moles encourages future studies of the middle ear morphology of this diverse group.
      

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Published in Volume 03, Issue 02 (2017)

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3D model related to the publication: Anatomy of the holotype of “Probelesodon kitchingi revisited, a chiniquodontid cynodont (Synapsida, Probainognathia) from the early Late Triassic of southern Brazil
Carolina Hoffmann Logo, Agustín Martinelli Logo and Marco Brandalise de Andrade Logo
Published online: 23/05/2023

Keywords: Computed Tomography; Cynodontia; Morphology; Triassic

https://doi.org/10.18563/journal.m3.194

  Abstract

    The present 3D Dataset contains the 3D model analyzed in the following publication: Carolina A. Hoffmann, A. G. Martinelli & M. B. Andrade. 2023. Anatomy of the holotype of “Probelesodon” kitchingi revisited, a chiniquodontid cynodont (Synapsida, Probainognathia) from the early Late Triassic of southern Brazil, Journal of Paleontology 

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Published in Volume 09, issue 02 (2023)

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3D models related to the publication: The late middle Miocene Mae Moh Basin of northern Thailand: the richest Neogene assemblage of Carnivora from Southeast Asia and a paleobiogeographic analysis of Miocene Asian carnivorans
Camille Grohé Logo, Louis de Bonis Logo, Yaowalak Chaimanee, Jérôme Surault Logo and Jean-Jacques Jaeger Logo
Published online: 03/06/2020

Keywords: Carnivora; Mustelidae; otters; skull; upper teeth

https://doi.org/10.18563/journal.m3.109

  Abstract

    The present 3D Dataset contains the 3D models described and figured in the following publication: Grohé C., Bonis L. de, Chaimanee Y., Chavasseau O., Rugbumrung M., Yamee C., Suraprasit K., Gibert C., Surault J., Blondel C., Jaeger J.-J. 2020. The late middle Miocene Mae Moh Basin of northern Thailand: the richest Neogene assemblage of Carnivora from Southeast Asia and a paleobiogeographic analysis of Miocene Asian carnivorans. American Museum Novitates. http://digitallibrary.amnh.org/handle/2246/7223 

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    Siamogale bounosa MM-54 View specimen

    M3#505

    3D model of the skull of Siamogale bounosa The zip file contains: - the 3D surface in PLY - the orientation files in .pos and .ori - the project in .ntw

    Type: "3D_surfaces"

    doi: 10.18563/m3.sf.505   state:published




    Download 3D surface file

    Vishnuonyx maemohensis MM-78 View specimen

    M3#506

    3D model of the skull of Vishnuonyx maemohensis The zip file contains: - the 3D surface in PLY - the orientation files in .pos and .ori - the project in .ntw

    Type: "3D_surfaces"

    doi: 10.18563/m3.sf.506   state:published




    Download 3D surface file

    M3#507

    3D model of the reconstructed upper teeth of Vishnuonyx maemohensis The zip file contains: - the 3D surface in PLY - the orientation files in .pos and .ori - the project in .ntw

    Type: "3D_surfaces"

    doi: 10.18563/m3.sf.507   state:published




    Download 3D surface file


 
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Published in Volume 06, issue 03 (2020)

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MicroCT survey of larval skeletal mineralization in the Cuban gar Atractosteus tristoechus (Actinopterygii; Lepisosteiformes)
Raphaël Scherrer Logo, Andrés Hurtado, Erik Garcia Machado Logo and Mélanie Debiais-Thibaud Logo
Published online: 17/05/2017

Keywords: Actinopterygii; development; Lepisosteiformes; mineralization; skeleton

https://doi.org/10.18563/m3.3.3.e3

  Abstract

    Using X-ray microtomography, we describe the ossification events during the larval development of a non-teleost actinopterygian species: the Cuban gar Atractosteus tristoechus from the order Lepisosteiformes. We provide a detailed developmental series for each anatomical structure, covering a large sequence of mineralization events going from an early stage (13 days post-hatching, 21mm total length) to an almost fully ossified larval stage (118dph or 87mm in standard length). With this work, we expect to bring new developmental data to be used in further comparative studies with other lineages of bony vertebrates. We also hope that the on-line publication of these twelve successive 3D reconstructions, fully labelled and flagged, will be an educational tool for all students in comparative anatomy. 

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Published in Volume 03, Issue 03 (2017)

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3D model related to the publication: The largest freshwater odontocete: a South Asian river dolphin relative from the Proto-Amazonia
Aldo Benites-Palomino Logo, Gabriel Aguirre-Fernández Logo, Patrice Baby, Diana Ochoa Logo, Ali Altamirano-Sierra Logo, John J. Flynn Logo, Marcelo R. Sánchez-Villagra Logo, Julia Tejeda Logo, Christian de Muizon Logo and Rodolfo Salas-Gismondi Logo
Published online: 21/03/2024

Keywords: Miocene; Odontoceti; Platanistidae; River dolphin

https://doi.org/10.18563/journal.m3.221

  Abstract

    The present 3D Dataset contains the 3D model analyzed in The largest freshwater odontocete: a South Asian river dolphin relative from the Proto-Amazonia. 

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Published in Volume 10, issue 01 (2024)

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3D model related to the publication: Cranial Anatomy of Indohyus indirae (Raoellidae), an artiodactyl from the Eocene of India, and its implications for raoellid biology
Sonam Patel, Avinash C. Nanda, Maëva J. Orliac Logo and J. G. M. Thewissen Logo
Published online: 25/09/2024

Keywords: Artiodactyla; Cetacea; skull anatomy

https://doi.org/10.18563/journal.m3.216

  Abstract

    The present 3D Dataset contains the 3D model of the skull of the raoellid Indohyus indirae described in Patel et al. 2024.
      

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Published in Volume 10, issue 03 (2024)

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3D models related to the publication: The early evolution of cranial appendages in Bovoidea revealed by new species of Amphimoschus (Mammalia: Ruminantia) from China
Yi-Kun Li, Bastien Mennecart Logo, Manuela Aiglstorfer Logo, Ni Xijun Logo, Li Qiang Logo and Tao Deng Logo
Published online: 07/09/2021

Keywords: mandible; Miocene; ruminant; skull

https://doi.org/10.18563/journal.m3.151

  Abstract

    The present 3D Dataset contains the 3D models of the holotype mandible and referred fragmented skull of the new species Amphimoschus xishuiensis analyzed in the article Li, Y.-K., Mennecart, B., Aiglstorfer, M., Ni, X.-J., Li, Q., Deng, T. 2021. The early evolution of cranial appendages in Bovoidea revealed by new species of Amphimoschus (Mammalia: Ruminantia) from China. Zoological Journal of the Linnean Society https://doi.org/10.1093/zoolinnean/zlab053 

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Published in Volume 07, issue 03 (2021)

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3D models related to the publication: Protocetid (Cetacea, Artiodactyla) bullae and petrosals from the Middle Eocene locality of Kpogamé, Togo: new insights into the early history of cetacean hearing
Mickaël Mourlam Logo and Maëva J. Orliac Logo
Published online: 31/05/2017

Keywords: archaeocete; auditory region; Lutetian; petrotympanic complex

https://doi.org/10.18563/m3.3.1.e2

  Abstract

    This contribution contains the 3D models described and figured in the following publication: Mourlam, M., Orliac, M. J. (2017), Protocetid (Cetacea, Artiodactyla) bullae and petrosals from the Middle Eocene locality of Kpogamé, Togo: new insights into the early history of cetacean hearing. Journal of Systematic Palaeontology https://doi.org/10.1080/14772019.2017.1328378
      

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Published in Volume 03, Issue 01 (2017)

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3D models related to the publication: Phylogenetic signal in anteater snout morphology: implications for interpreting rare vermilinguans fossils
Abdelkrim Hachemi-Rachedi, Guillaume Billet Logo, Lionel Hautier Logo and Juan D. Carrillo Logo
Published online: 09/01/2026

Keywords: 3D reconstruction; Endocranial anatomy; La Venta; Miocene; Xenarthra

https://doi.org/10.18563/journal.m3.278

  Abstract

    This contribution contains the 3D models described and figured in: Phylogenetic signal in anteater snout morphology: implications for interpreting rare vermilinguan fossils. Palaeobiodiversity and Palaeoenvironments

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Article state: in_press

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3D models related to the publication: Dental morphology evolution in early peratheriines, including a new morphologically cryptic species and findings on the largest early Eocene European metatherian.
Killian Gernelle Logo, Marc Godinot Logo, Bernard Marandat, Dominique Téodori, Sandrine Ladevèze Logo and Rodolphe Tabuce Logo
Published online: 06/01/2025

Keywords: France; Herpetotheriidae; molars; systematics; Ypresian

https://doi.org/10.18563/journal.m3.255

  Abstract

    This contribution contains the three-dimensional models of the most informative fossil material attributed to both Peratherium musivum Gernelle, 2024, and Peratherium maximum (Crochet, 1979), respectively from early and middle early Eocene French localities. These specimens, which document the emergence of the relatively large peratheriines, were analyzed and discussed in: Gernelle et al. (2024), Dental morphology evolution in early peratheriines, including a new morphologically cryptic species and findings on the largest early Eocene European metatherian. https://doi.org/10.1080/08912963.2024.2403602
      

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Published in Volume 11, issue 01 (2025)

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3D models related to the publication: “The functional significance of aberrant cervical counts in sloths: insights from automated exhaustive analysis of cervical range of motion”
Luisa J. Merten Logo, Armita R. Manafzadeh Logo, Eva C. Herbst Logo, Eli Amson Logo, Pablo S. Tambusso Logo, Patrick Arnold Logo and John A. Nyakatura Logo
Published online: 04/11/2023

Keywords: articular surfaces; cervical vertebrae; vertebral biomechanics; zygapophyses

https://doi.org/10.18563/journal.m3.215

  Abstract

    The present 3D Dataset contains the 3D models analyzed in Merten, L.J.F, Manafzadeh, A.R., Herbst, E.C., Amson, E., Tambusso, P.S., Arnold, P., Nyakatura, J.A., 2023. The functional significance of aberrant cervical counts in sloths: insights from automated exhaustive analysis of cervical range of motion. Proceedings of the Royal Society B. doi: 10.1098/rspb.2023.1592
      

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Published in Volume 09, issue 04 (2023)

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3D models related to the publication: Patterns of bilateral asymmetry and allometry in Late Devonian Polygnathus conodonts
Catherine Girard, Anne-Lise Charruault Logo, Ronan Ledevin Logo and Sabrina Renaud Logo
Published online: 03/03/2021

Keywords: Conodonts; Late Devonian; Polygnathus communis; Polygnathus glaber

https://doi.org/10.18563/journal.m3.126

  Abstract

    This contribution contains the 3D models of the set of Famennian conodont elements belonging to the species Polygnathus glaber and Polygnathus communis analyzed in the following publication: Renaud et al. 2021: Patterns of bilateral asymmetry and allometry in Late Devonian Polygnathus. Palaeontology. https://doi.org/10.1111/pala.12513 

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Published in Volume 07, issue 02 (2021)

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3D surface scan of the type specimen of Molassitherium delemontense Becker and Antoine, 2013: use of a 3D model for research and conservation issues
Olivier Maridet Logo, Gaëtan Rauber, Martine Rochat, Renaud Roch, Jérémy Tissier Logo, Jérémy Anquetin Logo and Damien Becker Logo
Published online: 19/02/2019

Keywords: Conservation; Early Oligocene; Rhinocerotidae; Switzerland

https://doi.org/10.18563/journal.m3.82

  Abstract

    This contribution provides for the first time the 3D model of the type specimen of Molassitherium delemontense (Mammalia, Rhinocerotidae) described in the following publication: Becker et al. (2013), Journal of Systematic Palaeontology, Vol. 11, Issue 8, 947–972, https://doi.org/10.1080/14772019.2012.699007. Conservation issues of the specimen and solutions using 3D model and 3D prints are detailed. 

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Published in Volume 05, issue 02 (2019)

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3D model related to the publication: The cranium of Proviverra typica (Mammalia, Hyaenodonta) and its impact on hyaenodont phylogeny and endocranial evolution
Morgane Dubied Logo, Bastien Mennecart Logo and Floréal Solé Logo
Published online: 26/08/2019

Keywords: brain; microtomography; Middle Eocene; Proviverrinae; skull

https://doi.org/10.18563/journal.m3.74

  Abstract

    This contribution contains the 3D model described and figured in the following publication: Dubied, M., Mennecart, B. and Solé, F. 2019. The cranium of Proviverra typica (Mammalia, Hyaenodonta) and its impact on hyaenodont phylogeny and endocranial evolution. Palaeontology. https://doi.org/10.1111/pala.12437 

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Published in Volume 05, issue 03 (2019)

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3D models related to the publication: A Dorcatherium (Mammalia, Ruminantia, middle Miocene) petrosal bone and the tragulid ear region.
Bastien Mennecart Logo and Loïc Costeur Logo
Published online: 01/10/2016

Keywords: inner ear; Miocene; phylogeny; ruminant

https://doi.org/10.18563/m3.2.1.e2

  Abstract

    The present 3D Dataset contains the 3D models analyzed in the article Mennecart, B., and L. Costeur. 2016. A Dorcatherium (Mammalia, Ruminantia, Middle Miocene) petrosal bone and the tragulid ear region. Journal of Vertebrate Paleontology 36(6), 1211665(1)-1211665(7). DOI: 10.1080/02724634.2016.1211665

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Published in Volume 02, Issue 01 (2016)

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3D model related to the publication: A find from the Ladakh Himalaya reveals a survival of madtsoiid snakes (Serpentes, Madtsoiidae) in India through the Late Oligocene
Wasim A. Wazir Logo, Rajeev Patnaik Logo, Ramesh K. Sehgal, Navin Kumar, Rohit Kumar, Ningthoujam P. Singh, Mohd A. Wazir and Deepak Choudhary
Published online: 24/04/2025

Keywords: Himalaya; Ladakh Molasse; Oligocene; Snake; Vertebra

https://doi.org/10.18563/journal.m3.271

  Abstract

    The present 3D Dataset contains the 3D model analyzed in Wazir, W. A., Sehgal, R. K., Čerňanský, A., Patnaik, R., Kumar, N., Singh, A. P. and Singh, N. P. 2022. A find from the Ladakh Himalaya reveals a survival of madtsoiid snakes (Serpentes, Madtsoiidae) in India through the late Oligocene. Journal of Vertebrate Paleontology, 41(6), e2058401. https://doi.org/10.1080/02724634.2021.2058401
      

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Published in Volume 11, issue 02 (2025)

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3D models related to the publication: Comparative anatomy of the vocal apparatus in bats and implication for the diversity of laryngeal echolocation.
Nicolas L. M. Brualla Logo, Laura A. B. Wilson Logo, Vuong T. Tu Logo, Richard . Carter Logo and Daisuke Koyabu Logo
Published online: 28/06/2024

Keywords: Chiroptera; larynx; mammalian nasopharyngeal morphology; vocal tract; x-ray microtomography

https://doi.org/10.18563/journal.m3.219

  Abstract

    The present 3D Dataset contains the 3D models analyzed in Brualla et al., 2024: Comparative anatomy of the vocal apparatus in bats and implication for the diversity of laryngeal echolocation. Zoological Journal of the Linnean Society, vol. zlad180. (https://doi.org/10.1093/zoolinnean/zlad180). Bat larynges are understudied in the previous anatomical studies. The description and comparison of the different morphological traits might provide important proxies to investigate the evolutionary origin of laryngeal echolocation in bats. 

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Published in Volume 10, issue 02 (2024)

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3D model related to the publication: On Roth's "human fossil" from Baradero, Buenos Aires Province, Argentina: morphological and genetic analysis
Lumila P. Menéndez Logo, Idalia G. López Cruz and Thomas Schmelzle
Published online: 06/10/2023

Keywords: 3D cranial reconstruction; anthropology collections; Argentinean Pampas; Holocene; Santiago Roth

https://doi.org/10.18563/journal.m3.202

  Abstract

    The present 3D Dataset contains the 3D model analyzed in the publication : On Roth’s “human fossil” from Baradero, Buenos Aires Province, Argentina: morphological and genetic analysis. The “human fossil” from Baradero, Buenos Aires Province, Argentina, is a collection of skeleton parts first recovered by Swiss paleontologist Santiago Roth and further studied by anthropologist Rudolf Martin. By the end of the 19th century and beginning of the 20th century it was considered as one of the oldest human skeletons from the southern cone. We studied the cranial anatomy and contextualized the ancient individual remains. We discuss the context of the finding, conducted an osteobiographical assessment and performed a 3D virtual reconstruction of the skull, using micro-CT-scans on selected skull fragments and the mandible. This was followed by the extraction of bone tissue and teeth samples for radiocarbon and genetic analyses, which brought only limited results due to poor preservation and possible contamination. We estimate that the individual from Baradero is a middle-aged adult male. We conclude that the revision of foundational collections with current methodological tools brings new insights and clarifies long held assumptions on the significance of samples that were recovered when archaeology was not yet professionalized. 
      

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Published in Volume 09, issue 04 (2023)

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3D models related to the publication: “Molar wear in house mice: insight into diet preferences at an ecological time scale?”
 
Sabrina Renaud Logo, Ronan Ledevin Logo, Caroline Romestaing Logo and Emilie A. Hardouin Logo
Published online: 28/07/2023

Keywords: dental functional morphology; mastication; Mus musculus domesticus; Sub-Antarctic environment

https://doi.org/10.18563/journal.m3.200

  Abstract

    This contribution contains 3D models of upper molar rows of house mice (Mus musculus domesticus) belonging to Western European commensal and Sub-Antarctic feral populations. These two groups are characterized by different patterns of wear and alignment of the three molars along the row, related to contrasted masticatory demand in relation with their diet. These models are analyzed in the following publication: Renaud et al 2023, “Molar wear in house mice, insight into diet preferences at an ecological time scale?”, https://doi.org/10.1093/biolinnean/blad091
      

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Published in Volume 09, issue 03 (2023)

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Page 4 of 10, showing 20 record(s) out of 199 total