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2025-12
Volume 11, issue 04
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ISSN: 2274-0422

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Page 7 of 10, showing 20 record(s) out of 200 total

3D models related to the publication: Hide and seek shark teeth in Random Forests: Machine learning applied to Scyliorhinus canicula
Fidji Berio Logo, Yann Bayle Logo, Sylvie Agret, Daniel Baum Logo, Nicolas Goudemand Logo and Mélanie Debiais-Thibaud Logo
Published online: 24/05/2022

Keywords: geometric morphometrics; machine learning; Scyliorhinus canicula; sharks; tooth morphology

https://doi.org/10.18563/journal.m3.164

  Abstract

    The present dataset contains the 3D models analyzed in Berio, F., Bayle, Y., Baum, D., Goudemand, N., and Debiais-Thibaud, M. 2022. Hide and seek shark teeth in Random Forests: Machine learning applied to Scyliorhinus canicula. It contains the head surfaces of 56 North Atlantic and Mediterranean small-spotted catsharks Scyliorhinus canicula, from which tooth surfaces were further extracted to perform geometric morphometrics and machine learning. 

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Published in Volume 08, issue 02 (2022)

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3D models related to the publication: Postcranial morphology of the extinct rodent Neoepiblema (Rodentia: Chinchilloidea): insights into the paleobiology of neoepiblemids
Leonardo Kerber Logo, Adriana M. Candela Logo, José D. Ferreira Logo, Flávio A. Pretto Logo, Jamile Bubadué Logo and Francisco R. Negri Logo
Published online: 20/10/2021

Keywords: Chinchilloidea; functional morphology; Giant rodents; Neogene; Solimões Formation.

https://doi.org/10.18563/journal.m3.140

  Abstract

    This contribution contains the 3D models of postcranial bones (humerus, ulna, innominate, femur, tibia, astragalus, navicular, and metatarsal III) described and figured in the following publication: “Postcranial morphology of the extinct rodent Neoepiblema (Rodentia: Chinchilloidea): insights into the paleobiology of neoepiblemids”. 

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Published in Volume 07, issue 04 (2021)

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3D models related to the publication: An unpredicted ancient colonization of the West Indies by North American rodents: dental evidence of a geomorph from the early Oligocene of Puerto Rico
Laurent Marivaux Logo, Jorge Velez-Juarbe Logo and Pierre-Olivier Antoine Logo
Published online: 16/07/2021

Keywords: Caribbean islands; Geomorpha; Paleobiogeography; Paleogene; Rodentia

https://doi.org/10.18563/journal.m3.128

  Abstract

    This contribution provides the raw files for the μCT-scan data and renderings of the three-dimensional digital models of two fossil teeth of a geomyin geomorph rodent (Caribeomys merzeraudi), discovered from lower Oligocene deposits of Puerto Rico, San Sebastian Formation (locality LACM Loc. 8060). These fossils were described, figured and discussed in the following publication: Marivaux et al. (2021), An unpredicted ancient colonization of the West Indies by North American rodents: dental evidence of a geomorph from the early Oligocene of Puerto Rico. Papers in Palaeontology. https://doi.org/10.1002/spp2.1388 

  Specimens

    Caribeomys merzeraudi LACM 162478 View specimen

    M3#712

    Right lower dp4: isolated deciduous premolar. The specimen was scanned with a resolution of 5 µm using a μ-CT-scanning station EasyTom 150 / Rx Solutions (Montpellier RIO Imaging, ISE-M, Montpellier, France). AVIZO 7.1 (Visualization Sciences Group) software was used for visualization, segmentation, and 3D rendering. This isolated tooth was prepared within a “labelfield” module of AVIZO, using the segmentation threshold selection tool.

    Type: "3D_surfaces"

    doi: 10.18563/m3.sf.712   state:published




    Download 3D surface file

    M3#714

    5µm µCT data set . Right lower dp4: isolated deciduous premolar. The specimen was scanned with a resolution of 5 µm using a μ-CT-scanning station EasyTom 150 / Rx Solutions (Montpellier RIO Imaging, ISE-M, Montpellier, France).

    Type: "3D_CT"

    doi: 10.18563/m3.sf.714   state:published




    Download CT data

    Caribeomys merzeraudi LACM 162449 View specimen

    M3#713

    Right lower molar (m1 or m2). The specimen was scanned with a resolution of 4.5 µm using a μ-CT-scanning station EasyTom 150 / Rx Solutions (Montpellier RIO Imaging, ISE-M, Montpellier, France). AVIZO 7.1 (Visualization Sciences Group) software was used for visualization, segmentation, and 3D rendering. This isolated tooth was prepared within a “labelfield” module of AVIZO, using the segmentation threshold selection tool.

    Type: "3D_surfaces"

    doi: 10.18563/m3.sf.713   state:published




    Download 3D surface file

    M3#715

    µCT data at 4.5µm

    Type: "3D_CT"

    doi: 10.18563/m3.sf.715   state:published




    Download CT data


 
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Published in Volume 07, issue 03 (2021)

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3D data and models related to the publication: An updated description of the osteology of the pancake tortoise Malacochersus tornieri (Testudines: Testudinidae) with special focus on intraspecific variation.
Anna-Katharina Mautner Logo, Ashley E. Latimer Logo, Uwe Fritz Logo and Torsten M. Scheyer Logo
Published online: 25/01/2017

Keywords: brain endocast; chelonian shell; micro computed tomography; Morphology; variability

https://doi.org/10.18563/m3.2.2.e4

  Abstract

    The present publication contains the µCT dataset and the 3D models analyzed in the following publication: Mautner, A.-K., A. E. Latimer, U. Fritz, and T. M. Scheyer. An updated description of the osteology of the pancake tortoise Malacochersus tornieri (Testudines: Testudinidae) with special focus on intraspecific variation. Journal of Morphology. https://doi.org/10.1002/jmor.20640 

  Specimens

    Malacochersus tornieri ZM 100.102 View specimen

    M3#129

    Virtual brain and inner ear endocast of Malacochersus tornieri (ZM 100.102; Zoological Museum of The University of Zurich). This virtual model is accompanied by the 3D dataset. Blue, endocranium; red, blood vessels; purple, semicircular canals; yellow, cranial nerves.

    Type: "3D_surfaces"

    doi: 10.18563/m3.sf.129   state:published




    Download 3D surface file

    M3#130

    3D dataset of skull of Malacochersus tornieri (ZM 100.102)

    Type: "3D_CT"

    doi: 10.18563/m3.sf.130   state:published




    Download CT data


 
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Published in Volume 02, Issue 02 (2017)

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Skeletogenesis during the late embryonic development of the catshark Scyliorhinus canicula (Chondrichthyes; Neoselachii)
Sébastien Enault, Sylvain Adnet Logo and Mélanie Debiais-Thibaud Logo
Published online: 25/04/2016

Keywords: Chondrichthyes; development; mineralization; Scyliorhinus canicula; skeleton

https://doi.org/10.18563/m3.1.4.e2

  Abstract

    Current knowledge on the skeletogenesis of Chondrichthyes is scarce compared with their extant sister group, the bony fishes. Most of the previously described developmental tables in Chondrichthyes have focused on embryonic external morphology only. Due to its small body size and relative simplicity to raise eggs in laboratory conditions, the small-spotted catshark Scyliorhinus canicula has emerged as a reference species to describe developmental mechanisms in the Chondrichthyes lineage. Here we investigate the dynamic of mineralization in a set of six embryonic specimens using X-ray microtomography and describe the developing units of both the dermal skeleton (teeth and dermal scales) and endoskeleton (vertebral axis). This preliminary data on skeletogenesis in the catshark sets the first bases to a more complete investigation of the skeletal developmental in Chondrichthyes. It should provide comparison points with data known in osteichthyans and could thus be used in the broader context of gnathostome skeletal evolution. 

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Published in Volume 01, Issue 04 (2016)

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3D models related to the publication: Springhares, flying and flightless scaly-tailed squirrels (Anomaluromorpha, Rodentia) are the squirrely mouse: comparative anatomy of the masticatory musculature and its implications on the evolution of hystricomorphy in rodents
 
Léa Da Cunha Logo, Pierre-Henri Fabre Logo and Lionel Hautier Logo
Published online: 05/07/2024

Keywords: anatomy; Anomaluromorpha; hystricomorphy; masticatory muscles

https://doi.org/10.18563/journal.m3.235

  Abstract

    This contribution contains the 3D model(s) described and figured in the following publication: Da Cunha, L., Fabre, P.-H. & Hautier, L. (2024) Springhares, flying and flightless scaly-tailed squirrels (Anomaluromorpha, Rodentia) are the squirrely mouse: comparative anatomy of the masticatory musculature and its implications on the evolution of hystricomorphy in rodents. Journal of Anatomy, 244, 900–928.
      

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Published in Volume 10, issue 03 (2024)

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3D models related to the publication: Redescription, taxonomic revaluation, and phylogenetic affinities of Proterochampsa nodosa (Archosauriformes: Proterochampsidae), early Late Triassic of Candelaria Sequence (Santa Maria Supersequence)
Daniel de Simão-Oliveira Logo, Felipe Lima Pinheiro Logo, Marco Brandalise de Andrade Logo and Flávio A. Pretto Logo
Published online: 04/07/2022

Keywords: Archosauriformes; Late Triassic; osteology; Proterochampsia; taxonomy

https://doi.org/10.18563/journal.m3.170

  Abstract

    The present 3D dataset contains the 3D models of the holotype of Proterochampsa nodosa that were built and analysed in “Redescription, taxonomic revaluation, and phylogenetic affinities of Proterochampsa nodosa (Archosauriformes: Proterochampsidae), early Late Triassic of Candelaria Sequence (Santa Maria Supersequence)”. 

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Published in Volume 08, issue 03 (2022)

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3D models related to the publication: Comparative anatomy and phylogenetic contribution of intracranial osseous canals and cavities in armadillos and glyptodonts (Xenarthra, Cingulata)
Kévin Le Verger Logo, Laureano Gonzalez Ruiz and Guillaume Billet Logo
Published online: 07/04/2023

Keywords: alveolar cavities; canals; cingulata; cranial anatomy; evolutionary scenarios.

https://doi.org/10.18563/journal.m3.157

  Abstract

    The present 3D Dataset contains the 3D models analyzed in the following publication: Le Verger K., González Ruiz L.R., Billet G. 2021. Comparative anatomy and phylogenetic contribution of intracranial osseous canals and cavities in armadillos and glyptodonts (Xenarthra, Cingulata). Journal of Anatomy 00: 1-30 p. https://doi.org/10.1111/joa.13512 

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Published in Volume 09, issue 02 (2023)

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3D models related to the publication: First partial cranium of Togocetus from Kpogamé (Togo) and the protocetid diversity in the Togolese phosphate basin.
Koffi E. Kassegne, Mickaël Mourlam Logo, Guillaume Guinot Logo, Yawovi Z. Amoudji Logo, Jeremy E. Martin Logo, Kodjo A. Togbe, Ampah K. Johnson and Lionel Hautier Logo
Published online: 22/06/2021

Keywords: Comparative anatomy; Middle Eocene; Paleoenvironment; phylogeny; Protocetidae

https://doi.org/10.18563/journal.m3.143

  Abstract

    This contribution contains the 3D models described and figured in the following publication: Kassegne K. E., Mourlam M. J., Guinot G., Amoudji Y. Z., Martin J. E., Togbe K. A., Johnson A. K., Hautier L. 2021. First partial cranium of Togocetus from Kpogamé (Togo) and the protocetid diversity in the Togolese phosphate basin. Annales de Paléontologie, Issue 2, April–June 2021, 102488. https://doi.org/10.1016/j.annpal.2021.102488  

  Specimens

    Togocetus cf. traversei ULDG-KPO1 View specimen

    M3#768

    The specimen consists of a partial cranium prepared out of a calcareous phosphate matrix. The partial cranium lacks the anterior part of the rostrum, the cranial roof, and most of the basicranium apart from the left zygomatic process of the squamosal. The maxilla, nasal, palatine, pterygoid, alisphenoid, and squamosal bones are preserved, as well as two incomplete dental rows described hereafter.

    Type: "3D_surfaces"

    doi: 10.18563/m3.sf.768   state:published




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    M3#770

    µCT . Resolution: 0.3156mm. This scan can easily be opened with Fiji, MorphoDig, 3DSlicer, or any software that reads .MHD file format. Also, the .RAW file can be opened easily with other software such as Avizo/Amira when providing the correct dimensions (which are enclosed within the file name)

    Type: "3D_CT"

    doi: 10.18563/m3.sf.770   state:published




    Download CT data


 
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Published in Volume 07, issue 02 (2021)

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3D models related to the publication: Wild versus lab house mice: Effects of age, diet, and genetics on molar geometry and topography.
Sabrina Renaud Logo, Caroline Romestaing Logo and Yoland Savriama Logo
Published online: 06/08/2021

Keywords: dental functional morphology; geometric morphometrics; hybridization; mastication; occlusal relief

https://doi.org/10.18563/journal.m3.141

  Abstract

    This contribution contains 3D models of upper molar rows of house mice (Mus musculus domesticus). The erupted part of the right row is presented for specimens belonging to four groups: wild-trapped mice, wild-derived lab offspring, a typical laboratory strain (Swiss) and hybrids between wild-derived and Swiss mice. These models are analyzed in the following publication: Savriama et al 2021: Wild versus lab house mice: Effects of age, diet, and genetics on molar geometry and topography. https://doi.org/10.1111/joa.13529 

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Published in Volume 07, issue 03 (2021)

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3D models related to the publication: Early Oligocene chinchilloid caviomorphs from Puerto Rico and the initial rodent colonization of the West Indies
Laurent Marivaux Logo, Jorge Velez-Juarbe Logo and Pierre-Olivier Antoine Logo
Published online: 07/09/2020

Keywords: Caribbean islands; Caviomorpha; Paleobiogeography; Paleogene; Rodentia

https://doi.org/10.18563/journal.m3.127

  Abstract

    This contribution contains the 3D models of the fossil teeth of two chinchilloid caviomorph rodents (Borikenomys praecursor and Chinchilloidea gen. et sp. indet.) discovered from lower Oligocene deposits of Puerto Rico, San Sebastian Formation (locality LACM Loc. 8060). These fossils were described and figured in the following publication: Marivaux et al. (2020), Early Oligocene chinchilloid caviomorphs from Puerto Rico and the initial rodent colonization of the West Indies. Proceedings of the Royal Society B. http://dx.doi.org/10.1098/rspb.2019.2806 

  Specimens

    Borikenomys praecursor LACM 162447 View specimen

    M3#638

    Right lower m3. This isolated tooth was scanned with a resolution of 6 µm using a μ-CT-scanning station EasyTom 150 / Rx Solutions (Montpellier RIO Imaging, ISE-M, Montpellier, France). AVIZO 7.1 (Visualization Sciences Group) software was used for visualization, segmentation, and 3D rendering. The specimen was prepared within a “labelfield” module of AVIZO, using the segmentation threshold selection tool.

    Type: "3D_surfaces"

    doi: 10.18563/m3.sf.638   state:published




    Download 3D surface file

    Borikenomys praecursor LACM 162446 View specimen

    M3#639

    Fragment of lower molar (most of the mesial part). This isolated broken tooth was scanned with a resolution of 6 µm using a μ-CT-scanning station EasyTom 150 / Rx Solutions (Montpellier RIO Imaging, ISE-M, Montpellier, France). AVIZO 7.1 (Visualization Sciences Group) software was used for visualization, segmentation, and 3D rendering. The specimen was prepared within a “labelfield” module of AVIZO, using the segmentation threshold selection tool.

    Type: "3D_surfaces"

    doi: 10.18563/m3.sf.639   state:published




    Download 3D surface file

    indet indet LACM 162448 View specimen

    M3#640

    Fragment of either an upper tooth (mesial laminae) or a lower tooth (distal laminae). The specimen was scanned with a resolution of 6 µm using a μ-CT-scanning station EasyTom 150 / Rx Solutions (Montpellier RIO Imaging, ISE-M, Montpellier, France). AVIZO 7.1 (Visualization Sciences Group) software was used for visualization, segmentation, and 3D rendering. This fragment of tooth was prepared within a “labelfield” module of AVIZO, using the segmentation threshold selection tool.

    Type: "3D_surfaces"

    doi: 10.18563/m3.sf.640   state:published




    Download 3D surface file


 
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Published in Volume 06, issue 04 (2020)

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3D models related to the publication: A new prozostrodontian cynodont (Eucynodontia, Probainognathia) from the Upper Triassic of southern Brazil
Micheli Stefanello Logo, Leonardo Kerber Logo, Agustín Martinelli Logo and Sérgio Dias-da-Silva Logo
Published online: 08/10/2020

Keywords: Late Triassic; lower jaw; Micro-CT; Prozostrodontia

https://doi.org/10.18563/journal.m3.120

  Abstract

    This contribution contains the 3D model(s) described and figured in the following publication: The present 3D Dataset contains the 3D models and CT-Scan slices of the lower jaws and teeth analyzed in “A new prozostrodontian cynodont (Eucynodontia, Probainognathia) from the Upper Triassic of southern Brazil”. https://doi.org/10.1080/02724634.2020.1782415 

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Published in Volume 06, issue 05 (2020)

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3D models related to the publication: New record of Neosaimiri (Cebidae, Platyrrhini) from the late Middle Miocene of Peruvian Amazonia
 
Laurent Marivaux Logo, Rodolfo Salas-Gismondi Logo and Pierre-Olivier Antoine Logo
Published online: 10/07/2020

Keywords: Laventan; Neogene; Paleobiogeography; Peru; Tropical South America

https://doi.org/10.18563/journal.m3.119

  Abstract

    This contribution contains the 3D models of the fossil teeth of a small-bodied platyrrhine primate, Neosaimiri cf. fieldsi (Cebinae, Cebidae, Platyrrhini) discovered from Laventan deposits (late Middle Miocene) of Peruvian Amazonia, San Martín Department (TAR-31: Tarapoto/Juan Guerra vertebrate fossil-bearing locus n°31). These fossils were described and figured in the following publication: Marivaux et al. (2020), New record of Neosaimiri (Cebidae, Platyrrhini) from the late Middle Miocene of Peruvian Amazonia. Journal of Human Evolution. https://doi.org/10.1016/j.jhevol.2020.102835 

  Specimens
 
  M3 article infos

Published in Volume 06, issue 03 (2020)

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3D models related to the publication: Gnathovorax cabreirai: a new early dinosaur and the origin and initial radiation of predatory dinosaurs
Cristian Pacheco, Rodrigo T. Müller Logo, Max C. Langer Logo, Flávio A. Pretto Logo, Leonardo Kerber Logo and Sérgio Dias-da-Silva Logo
Published online: 08/11/2019

Keywords: brain; Dinosauria; endocranial morphology; Herrerasauridae; inner ear.

https://doi.org/10.18563/journal.m3.103

  Abstract

    The present 3D Dataset contains the 3D models of the skull, brain and inner ear endocast analyzed in “Gnathovorax cabreirai: a new early dinosaur and the origin and initial radiation of predatory dinosaurs”. 

  Specimens
 
  M3 article infos

Published in Volume 06, issue 01 (2020)

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3D models related to the publication: Systematic and locomotor diversification of the Adapis group (Primates, Adapiformes) in the late Eocene of the Quercy (Southwest France), revealed by humeral remains.
Judit Marigó Logo, Nicole Verrière and Marc Godinot Logo
Published online: 20/12/2018

Keywords: Adapis; humeri; locomotion; Quercy

https://doi.org/10.18563/journal.m3.75

  Abstract

    The present 3D Dataset contains the 3D models analyzed in the publication “Systematic and locomotor diversification of the Adapis group (Primates, Adapiformes) in the late Eocene of the Quercy (Southwest France), revealed by humeral remains”. In this paper, twenty humeral specimens from the old and new Quercy collections attributed to the fossil primates Adapis and Palaeolemur are described and analysed together. In this dataset only the scans of the fossils belonging to the collections of Université de Montpellier are provided.
    In our paper (Marigó et al., 2019) we provide a qualitative and quantitative analysis of the different humeri, revealing that high variability is present within the “Adapis group” sample. Six different morphotypes are identified, confirming that what has often been called “Adapis parisiensis” is a mix of different species that present different locomotor adaptations. 

  Specimens
 
  M3 article infos

Published in Volume 04, issue 03 (2018)

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Neurocranium and endocranial anatomy of a new large Triassic dapediid.
Ashley E. Latimer Logo and Sam Giles Logo
Published online: 23/08/2018

Keywords: dapedium; Neopterygian; neurocranium; Triassic

https://doi.org/10.18563/journal.m3.44

  Abstract

    The present 3D Dataset contains the 3D models analyzed in: "a giant dapediid from the Late Triassic of Switzerland and insights into neopterygian phylogeny", Royal Society Open Science, https://doi.org/10.1098/rsos.180497 

  Specimens

    Scopulipiscis saxciput PIMUZ A/I 3026 View specimen

    M3#177

    3D surfaces of the skull and endocranial spaces inside neurocranium, including the aortic canal, braincase, fossa bridgei, lateral cranial canal, nerves and other passageways, notochord, posterior myodome, and right semicircular canals.

    Type: "3D_surfaces"

    doi: 10.18563/m3.sf.177   state:published




    Download 3D surface file

    M3#178

    Scan of the neurocranium of PIMUZ A/I 3026

    Type: "3D_CT"

    doi: 10.18563/m3.sf.178   state:published




    Download CT data


 
  M3 article infos

Published in Volume 04, issue 02 (2018)

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3D models related to the publication: Infrasonic and ultrasonic hearing evolved after the emergence of modern whales
Maëva J. Orliac Logo and Mickaël Mourlam Logo
Published online: 08/06/2017

Keywords: archaeocete; Artiodactyla; bony labyrinth; cochlea; Lutetian

https://doi.org/10.18563/m3.3.2.e4

  Abstract

    This contribution contains the 3D models of the bony labyrinths of two protocetid archaeocetes from the locality of Kpogamé, Togo, described and figured in the publication of Mourlam and Orliac (2017). https://doi.org/10.1016/j.cub.2017.04.061  

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Published in Volume 03, Issue 02 (2017)

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3D cranium models of fossils of large canids (Canis lupus) from Goyet, Trou des Nutons and Trou Balleux, Belgium
Allowen Evin Logo, Emmanuel Gilissen and Mietje Germonpré Logo
Published online: 06/11/2015

Keywords: Archaeozoology; Dog; Domestication; Pleistocene; Wolf

https://doi.org/10.18563/m3.1.3.e2

  Abstract

    Archaeozoological studies are increasingly using new methods and approaches to explore questions about domestication. Here, we provide 3D models of three archaeological Canis lupus skulls from Belgium originating from the sites of Goyet (31,680±250BP; 31,890+240/-220BP), Trou des Nutons (21,810±90BP) and Trou Balleux (postglacial). Since their identification as either wolves or early dogs is still debated, we present these models as additional tools for further investigating their evolutionary history and the history of dog domestication. 

  Specimens
 
  M3 article infos

Published in Volume 01, Issue 03 (2015)

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3D models related to the publication: New Loricata remains from the Pinheiros-Chiniquá Sequence (Middle-Upper Triassic), southern Brazil.
Letícia Rezende de Oliveira Logo, Atila A. Stock Da-Rosa Logo, Marcel, B. Lacerda Logo and Flávio A. Pretto Logo
Published online: 05/11/2022

Keywords: Dinodontosaurus AZ; Loricata; Middle Triassic; Prestosuchus

https://doi.org/10.18563/journal.m3.181

  Abstract

    The present 3D Dataset contains the 3D models of an ilium, a vertebra, and a partial scapula of Prestosuchus sp. that were analyzed in “New Loricata remains from the Pinheiros-Chiniquá Sequence (Middle-Upper Triassic), southern Brazil”. 

  Specimens
 
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Published in Volume 08, issue 04 (2022)

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3D models related to the publication: Brain endocast of two non-mammaliaform cynodonts from southern Brazil: an ontogenetic and evolutionary approach.
Carolina Hoffmann Logo, Pablo Rodrigues, Marina B. Soares Logo and Marco Brandalise de Andrade Logo
Published online: 09/08/2022

Keywords: Brain evolution; Computed Tomography; Cynodontia; Encephalization Quotient; Triassic.

https://doi.org/10.18563/journal.m3.172

  Abstract

    This contribution contains the 3D model(s) described and figured in the following publication: Carolina A. Hoffmann, P. G. Rodrigues, M. B. Soares & M. B. Andrade. 2021. Brain endocast of two non-mammaliaform cynodonts from southern Brazil: an ontogenetic and evolutionary approach, Historical Biology, 33:8, 1196-1207, https://doi.org/10.1080/08912963.2019.1685512 

  Specimens
 
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Published in Volume 08, issue 03 (2022)

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Page 7 of 10, showing 20 record(s) out of 200 total